amep.timecor.msd

amep.timecor.msd(start, frame)

Calculates the mean-square displacement.

Parameters:

• start (np.ndarray) – Unwrapped or nojump coordinates at the start time.

• frame (np.ndarray) – Unwrapped or nojump coordinates at a later time.

Returns:

Mean-square displacement averaged over all given coordinates.

Return type:

float