amep.reader.H5amepReader#

class amep.reader.H5amepReader(directory, trajfile='traj.h5amep', **kwargs)#

Reads simulation data from an HDF5 trajectory file.

__init__(directory, trajfile='traj.h5amep', **kwargs)#

Reader for an HDF5 trajectory file of name filename in the given directory.

Parameters:

directory (str) – Simulation directory.
trajfile (str, optional) – File name of the HDF5 file. The default is TRAJFILENAME.
**kwargs – Additional keyword arguments are ignored.

Return type:

None.

Methods

__init__(directory[, trajfile])

Reader for an HDF5 trajectory file of name filename in the given directory.

Attributes

`d`
`dt`
`filename`	The path to the HDF5-file that contains the writers data.
`nth`
`savedir`
`start`
`steps`	The array of simulation steps for each saved frame.
`stop`
`times`	The array of physical times for each saved frame.
`type`	The type of trajectory.
`version`	AMEP version with which the h5amep file has been created.

property filename: Path#: The path to the HDF5-file that contains the writers data.

property steps: ndarray#

The array of simulation steps for each saved frame.

The simulation steps are also used to index the frame data in the HDF5-File.

property version#

AMEP version with which the h5amep file has been created.